TriticeaeSSRdb: The Triticeae Simple Sequence Repeat Database

Species Available (21)

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Aegilops bicornis

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Aegilops longissima

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Aegilops searsii

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Aegilops sharonensis

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Aegilops speltoides

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Aegilops tauschii

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Aegilops umbellulata

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Dasypyrum villosum

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Hordeum marinum

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Hordeum spontaneum

(Wild barley)

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Hordeum vulgare

(Barley)

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Hordeum vulgare var. nudum

(Highland barley)

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Leymus chinensis

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Thinopyrum elongatum

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Triticum aestivum

(Common wheat)

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Triticum aestivum ssp. tibetanu Shao

(Tibetan semi-wild wheat)

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Triticum dicoccoides

(Wild emmer)

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Triticum monococcum

(Domesticated einkorn)

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Triticum spelta

(Spelt)

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Triticum durum

(Durum)

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Triticum urartu

(Urartu)

Total number of SSRs

3,891,705
A mononucleotide repeat exceeding 15 units

Total length of SSRs(bp)

65,890,731
21 species

SSR IN GENIC REGION

1,181,578
include repeats in intron,CDS,UTR

SSR IN INTERGENIC REGION

2,710,127
include repeats in intergenic region

SSR distribution across species

Distribution of SSR motif types

Genomic SSRs In Each Species